Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015920938.1_cds_XP_016469997.1_62497
CDS Infomation

[gene=LOC107792306] [db_xref=GeneID:107792306] [protein=DNA-binding protein SMUBP-2-like] [partial=5'] [protein_id=XP_016469997.1] [location=complement(join(59975..60151,60248..60382,60451..60595,60763..60866,61012..61218,62711..62968,63198..63251,63630..63702,64239..64426,65676..>65711))] [gbkey=CDS]
Sequence

TTCACTCCTTTTAATCGCAACCTTGATCACTCTCAGAAAGATGCCATCTCAAAGGCGCTT
TCATCCAAGAACGTATTTTTGCTGCATGGGCCTCCTGGAACTGGGAAGACAACTACTGTT
GTTGAGATTATTTTGCAGGAAGCGAAACGTGGTTCAAAGATCCTTGCTTGTGCTGCTTCA
AATATTGCTGTTGATAACATTGTTGAGAGACTTGTTCCACACAGAGTGAAGTTGGTGAGA
TTGGGACATCCGGCACGTATGCTCCCACAAGTATTGGATAGCGCTCTTGATGCCCAGGTT
CTCCGTGGTGATAATAGTGCTCTTGCAAATGACATCCGCAAGGAGATGAAGACATTGAAT
GGAAAGTTATTAAAAGCTAAAGATAGAAATGCAAAGAGGGATATCAGGAGGGAGCTCAAG
TCTCTTTCCAAAGAAGAGCGTAAAAGGCAGCAGCTAGCAGTAACAGATGTTCTTAAGAAT
GCAGATGTAGTCCTGACAACATTGACTGGGGCATTGTCAAAGAAGTTGGACGGCATGTCA
TTTGATTTGGTTATTATTGATGAAGCTGCTCAGGCATTGGAAATAGCATGCTGGATTGCT
TTATTGAAGGGATCAAGGTGTATATTGGCTGGAGATCATCTCCAGCTTCCGCCAACCATT
CAAAGTGTAGAAGCTGAGAAGAAAGGACTGGGAAAGACACTTTTTGAACGTTTAGCAGAT
TTGTACGGAGATGAAATCACATCTATGCTCACTGTTCAGTACCGCATGCATAAACTGATT
ATGAACTGGTCATCTGGAGAGCTGTATGATAATAAGATTGAAGCCCATTCAAGTGTTGCC
AGTCATATGTTATATCACCTTGAGGATGTGAAGAAAACACCTTCCACAGAATCAACCCTT
CTGCTCATAGACATAGCTGGGTGTGACATGGAAGAAAAAAAGGATGAGGAAGATAGCACA
TTGAATGAAGGTGAAGCTGAGGTTGCCATTGCCCATGCAAAGAGACTAGTCGAAAGCGGA
GTCCGAGCTTCTGATATTGGACTAATCACTCCTTATGCAGCACAGGTCGTTTTCTTGAAA
AAGCTCAAAAGCAATGAAGAAAAATTAAAAGAAATGGAGATCTCGACTGTTGATGGTTTC
CAGGGTCGAGAAAAAGAAGCCATTATCATTTCTATGGTCCGATCAAACTCAAAGAAAGAG
GTGGGATTTCTTAGTGACAGAAGGAGAATGAATGTTGCTGTGACACGAGCAAGGAGACAG
TGCTGTCTTGTATGTGATACTGAGACAGTCAGTGGTGATAAATTCTTGAAGAGGTTGATT
GAGTACTTTGAGGAGCATGGTGAATATTTGAGTGCTTCGGAGTATGGAAATGAATAG

Peptide Sequence

PEP ID

XP_016469997.1
PEP Infomation

PREDICTED: DNA-binding protein SMUBP-2-like, partial [Nicotiana tabacum]
Sequence

FTPFNRNLDHSQKDAISKALSSKNVFLLHGPPGTGKTTTVVEIILQEAKRGSKILACAAS
NIAVDNIVERLVPHRVKLVRLGHPARMLPQVLDSALDAQVLRGDNSALANDIRKEMKTLN
GKLLKAKDRNAKRDIRRELKSLSKEERKRQQLAVTDVLKNADVVLTTLTGALSKKLDGMS
FDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTIQSVEAEKKGLGKTLFERLAD
LYGDEITSMLTVQYRMHKLIMNWSSGELYDNKIEAHSSVASHMLYHLEDVKKTPSTESTL
LLIDIAGCDMEEKKDEEDSTLNEGEAEVAIAHAKRLVESGVRASDIGLITPYAAQVVFLK
KLKSNEEKLKEMEISTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQ
CCLVCDTETVSGDKFLKRLIEYFEEHGEYLSASEYGNE

Transcript Sequence

Gene sequence data has not been registered.